Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX342545: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-162789' containing sample 'Subdoligranulum sp. 6_1_47FAA'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.5M spots, 710.6M bases, 440.2Mb downloads

UUID: a4c949f4-89dc-4abe-8c07-77fbc9154e66

Design: Illumina sequencing of Subdoligranulum sp. 6_1_47FAA via random selection

Submitted by: Broad Institute (BI)

Study: Reference Genome for the Human Microbiome Project

PRJNA40039 • SRP027403 • All experiments • All runs

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<b><i>Subdoligranulum</i> sp. 6_1_47FAA</b>. This is a strain from the human gastrointestinal tract.

Sample: Generic sample from Subdoligranulum sp. 6_1_47FAA

SAMN00691192 • SRS255127 • All experiments • All runs

Organism: Subdoligranulum sp. 6_1_47FAA

Library:

Name: Solexa-162789

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

gssr_id: 333809.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:4EQLA

material_type: DNA:DNA Somatic

product_order: PDO-1171

product_part_number: P-MCV-0001

project: G37098

research_project: RP-208

root_sample_id: SM-3VGE1

sample_id: SM-4EQLA

work_request: 36473

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-07-15 19:43:34.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 3.5M spots, 710.6M bases, 440.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR960825	3,517,919	710.6M	440.2Mb	2013-08-31

ID:: 484145

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